Insertion junction: CLIP2.002514_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002514
Chromosome:chromosome 2
Location:408585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075850 STK12,SNRK2A,SNRK2,STPK12,ARS11 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCACGCGCCCCTTCTTTCCACTCCGTCCTGCATGGACGGCTACCCCAC
Internal bar code:TGAGTCGGTGACAGAACACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGATTCACCCACGGAGC
Suggested primer 2:CACCTGCAACCTTGATGTGC