Insertion junction: CLIP2.002516_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002516
Chromosome:chromosome 3
Location:5312622
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTCACACGCGGGATCCTATCCCTTGATATCCCCCCGACCCAGCCCA
Internal bar code:TTTCCGTATGTAACTACAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:108
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGCATAGTCCCGAGTGT
Suggested primer 2:TTTCTAACTGAGCCTGGCCG