Insertion junction: CLIP2.002536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002536
Chromosome:chromosome 9
Location:3368291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395584 (1 of 139) IPR011011 - Zinc finger, FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCGTCACGCGCGTCCGCCGCACCCCACCCGCCTTGTCTGACCTCTCG
Internal bar code:ATTGTGCGCTTCGGTGATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGACAGGCTACACGTG
Suggested primer 2:GAGGGAAGCAGCTGTGTGAT