Insertion junction: CLIP2.002536_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002536
Chromosome:chromosome 16
Location:3212815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGACGCTGCGTGCGGGACACGGCGCCTGTGCTGCTGTGCCCCATTG
Internal bar code:GGTTGTTGCTGTTGCAGAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2660
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCCCGTGTGTACTGT
Suggested primer 2:CAGGTCCACCATGCAGCTAA