Insertion junction: CLIP2.002539_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002539
Chromosome:chromosome 9
Location:2569127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGACCGACCGGCGTGCGCCCCAGTCTAGCATCACACGCTGAACTCTA
Internal bar code:TGGTCGCTACATTCCGTAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCGTGAGCATAGACGC
Suggested primer 2:AAGAAGCAGCAGGACGGAAA