Insertion junction: CLIP2.002541_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002541
Chromosome:chromosome 16
Location:2480530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660390 CSR1 (1 of 1) PF00415//PF00685 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Sulfotransferase domain (Sulfotransfer_1); Carbohydrate sulfotransferase-related 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTTGACCAGCTGCTGCGGGTGGTAGTGGCGCACGCAGTGCTTCTGG
Internal bar code:TACGATTGTTTATTTTGCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCGTGGACCGATACTA
Suggested primer 2:GTTGGGCTTGACACAGCAAG