Insertion junction: CLIP2.002545_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002545
Chromosome:chromosome 12
Location:3625796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513254 (1 of 2) K15340 - DNA cross-link repair 1A protein (DCLRE1A, SNM1A, PSO2) 3'UTR
Cre12.g513300 CGL23 Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATAAGGTTGTTCGTGTGAGCGAACGGCCTGGTCAACTGGTGCGGCCGG
Internal bar code:GTTTAGGCCCTATGGAAACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACGAAACGGATGAGGA
Suggested primer 2:CCAGAAACGCGCAAAGTTGA