Insertion junction: CLIP2.002556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002556
Chromosome:chromosome 9
Location:1472126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399914 SSA8 cilia-sensing, structure and/or assembly; (1 of 1) K10766 - alkylated DNA repair protein alkB homolog 4 (ALKBH4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTGCACTTGTACAGTTGTACGCACCTGCTTGGGATGAACTGACAAG
Internal bar code:AACTGTGCCTATGGGGCTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:7825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGACACGTCCGACATAG
Suggested primer 2:TTTGAGTACACAGCGGTCCC