Insertion junction: CLIP2.002556_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002556
Chromosome:chromosome 9
Location:1472134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399914 SSA8 cilia-sensing, structure and/or assembly; (1 of 1) K10766 - alkylated DNA repair protein alkB homolog 4 (ALKBH4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGATCAACAAGGAGGTGGCTGCCTTAGGGAGGCAGGAAAAGGGCTGAG
Internal bar code:TACTGTCACAGCGTCGCAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2837
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAGTACACAGCGGTCCC
Suggested primer 2:CTCCGACACGTCCGACATAG