Insertion junction: CLIP2.002560_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002560
Chromosome:chromosome 4
Location:3453771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227700 CDS
Cre04.g227750 (1 of 1) PF08573 - DNA repair protein endonuclease SAE2/CtIP C-terminus (SAE2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCAAAGACATGAATGATAAGACACCCGTACAAAGTGAGAGGTCCAAG
Internal bar code:GCTGCAATCAGCGCTGTAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACTACACCCACCATCCCAC
Suggested primer 2:GCCTCAGACATCTACGAGCC