Insertion junction: CLIP2.002577_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002577
Chromosome:chromosome 16
Location:6238351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676450 CPLD39 Conserved in the Plant Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAAGTTATTGTTACAATGTGACCAGCCAAGCTGGATCTCAAGGAACCT
Internal bar code:ACTGTCGGTTTATCCGACGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3138
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCAGGTTTCGAGCAGTA
Suggested primer 2:ATTGTACAGCGTGCGAAGGA