Insertion junction: CLIP2.002579_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002579
Chromosome:chromosome 2
Location:3676340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATCGTAATGCCGCCAGCGGCTCGGGATGTCGCCAAACAATGTCAAAA
Internal bar code:AAGGCTCTAACCTTACTCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGTGAGTGCCTGTACT
Suggested primer 2:GCAGTTTGACAAGCCCACTG