Insertion junction: CLIP2.002588_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002588
Chromosome:chromosome 8
Location:143618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358538 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTTTGACGGCATGCAAACTCGCAAATCACTGTCCTTCTATCATGGG
Internal bar code:GGTATATGTGCGGAGGGATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCACACTCCATAGAGCTC
Suggested primer 2:AAATGGGATGCAGGGAGGTG