Insertion junction: CLIP2.002599_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002599
Chromosome:chromosome 12
Location:564793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494000 CGL82 (1 of 2) IPR002083//IPR008974 - MATH/TRAF domain // TRAF-like; Conserved, expressed protein with meprin and TRAF homology domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTGACCGATGCTGGCGTGCCGGCTGTTGTTCTAGTTTGCGCTTGAAA
Internal bar code:AAGGTAGGTTTAACCGGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTGGACCTTCCGTGTG
Suggested primer 2:TCCATGATGCAGCGGTCTAC