Insertion junction: CLIP2.002611_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002611
Chromosome:chromosome 16
Location:5893744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679250 ELI1,ELIP2,ELI2,ELIP1 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTAGGGAAAGGGGAGAGGGGAGGGGGAATAAGCAGGGAGGGAGAGAG
Internal bar code:GTTTCATTTAAACGTAGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2754
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGTGCACTAGCTGCCA
Suggested primer 2:ACAGGAAGGGTAGTGGGGTT