Insertion junction: CLIP2.002611_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002611
Chromosome:chromosome 16
Location:5893747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679250 ELI1,ELIP2,ELI2,ELIP1 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCAACGTTAACCCCTCCCTCTCCCCTCTCCCTACCACCACACGCAGA
Internal bar code:GGAACAGGGGGAGACCGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2773
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGAAGGGTAGTGGGGTT
Suggested primer 2:TTAACGTGCACTAGCTGCCA