Insertion junction: CLIP2.002626_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002626
Chromosome:chromosome 3
Location:5849152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188250 AGP4,STA6 ADP-glucose pyrophosphorylase small subunit; (1 of 1) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGAGGTCCCGCCACCTCCGTCTGCTCTCCATCACCAACGTCTCCGC
Internal bar code:TCTCTCTTCGCTGAGAGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCATGGGCATCTACGTC
Suggested primer 2:CTCTACCTCCGCAGATGCAG