Insertion junction: CLIP2.002640_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002640
Chromosome:chromosome 5
Location:2410121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238500 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) 3'UTR
Cre05.g238550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATATCCCCTCCATAGCTTCTGGGATTGCCAGCTACATATAGTAGCTGT
Internal bar code:CCGACCTATGGAGAAAGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGCGGTGAAGTTGGG
Suggested primer 2:TGCAGTGTAGAAGGCAAGGG