Insertion junction: CLIP2.002641_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002641
Chromosome:chromosome 2
Location:5225828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112300 MOT15,CAL3 Calpain family cysteine protease; (1 of 2) K08582 - calpain-15 [EC:3.4.22.-] (CAPN15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGGGAATGGTGCCAACAACAGCTTCCCTCTCCCTTGCTCGTTGGGC
Internal bar code:TGTATTTGACGTGTGCATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATATGTCGAGCGTGCT
Suggested primer 2:CGCAGCTGCAGGAACTTTTT