Insertion junction: CLIP2.002643_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002643
Chromosome:chromosome 3
Location:7227277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207750 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGGTGCGCAGCGTACGAAAGGCTAATTGACCACGGCGAGGATTCGG
Internal bar code:TCTTCTAAAACTGGCTGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCATATCGCTGTCGCTCA
Suggested primer 2:TGATGTTGCAGCGGTAACCT