Insertion junction: CLIP2.002647_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002647
Chromosome:chromosome 12
Location:3449502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497400 CGL119 (1 of 1) PTHR13408:SF0 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4; possible RNA polymerase III subunit 5'UTR
lncRNA_TCONS_00231339 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAGCTTATCATACCAAGTGCTTGTATACGAATCAGCTTCACACGCCG
Internal bar code:ACAACAATTTGATCCAACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:557
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTATGGCGTGAGGGAA
Suggested primer 2:CAGAAAAGGTTGCCGCGAAA