Insertion junction: CLIP2.002650_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002650
Chromosome:chromosome 6
Location:1425305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259900 ATPC1,ATPC Chloroplast ATP synthase gamma chain; (1 of 1) K02115 - F-type H+-transporting ATPase subunit gamma (ATPF1G, atpG) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCATGTAAAGCATTTGCAGTACGTTTGGCCTCTGCATTGCGCCCACGT
Internal bar code:ATCAAATGGTCCCTCTTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:60.3053
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCTTGCGTGAGTGCGTG
Suggested primer 2:CGTGAATTTGCGTGGTTGGT