Insertion junction: CLIP2.002651_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002651
Chromosome:chromosome 9
Location:5352528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407801 AKC1 (1 of 1) PTHR10566//PTHR10566:SF41 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // SUBFAMILY NOT NAMED; ABC1/COQ8 ser/thr kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAAACCGAGATCCAGAACCCGAGACCAGTAGGTGGTGGTGGCGACGA
Internal bar code:GCGAGGGGGTTGTTTTTGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACTGGCTCGACAATGT
Suggested primer 2:TGGTGTCGGTGATGTGTGAG