Insertion junction: CLIP2.002654_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002654
Chromosome:chromosome 6
Location:2322176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267600 LCYE,LEC1,LCYE1 (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase; lycopene epsilon cyclase, chloroplast precursor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGCAAGCGAGTAGTTACCTGCTCCTTCACCAGCGCGGCCTCATAGTG
Internal bar code:AAATAGGTGGGATATGTCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTAGAGCGTTGTTGGCT
Suggested primer 2:TGCGTGTGTAAGTCCAGCAT