Insertion junction: CLIP2.002675_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002675
Chromosome:chromosome 13
Location:3395839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586750 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGCACAACCGGCTTTTACGCTCCTTACCGCAATGGCGAACGTCGTT
Internal bar code:GAGGCTCACTTTACGCCAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1880
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGCTGACAATCGCACG
Suggested primer 2:GCACGGGGCCATACTAAACT