Insertion junction: CLIP2.002679_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002679
Chromosome:chromosome 13
Location:1699090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574200 PAP2 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACAGGTTACACGCTCCAACTGTGCGACCACGCAGCCGCTTTTTCCAC
Internal bar code:GACCTCGCTGTGCCTCTCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGGCTACTACGGGAGC
Suggested primer 2:CTTGGTCCACAGCTGCAAAC