Insertion junction: CLIP2.002679_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002679
Chromosome:chromosome 13
Location:1699094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574200 PAP2 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTCTACACAGGCTACGAGATCAATGACCGCGGCCGCATCACGGCCA
Internal bar code:GACCTCGCTGTGCCTCTCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3609
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTCCACAGCTGCAAAC
Suggested primer 2:GTCATGGCTACTACGGGAGC