Insertion junction: CLIP2.002686_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002686
Chromosome:chromosome 12
Location:3586278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496150 (1 of 1) PTHR20953//PTHR20953:SF4 - KINASE-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCTTGGGAGCCTTCTTCGCGCCCACGGCCGGCGGAGGCGGCACATT
Internal bar code:ACGGACTCGTAGGGAGGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTGATAACGCCCAGGT
Suggested primer 2:ATCTGCAACCAGTCCTGACG