Insertion junction: CLIP2.002689_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002689
Chromosome:chromosome 1
Location:6086327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043100 (1 of 1) PTHR30615//PTHR30615:SF5 - UNCHARACTERIZED PROTEIN YJBQ-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGCCTTCGCACGCCAGCGCGCACAAAAGCGCTTGCTTGAACAAGC
Internal bar code:ACCAGGGCGTTACCTTATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1530
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGACGTTGTCTTTGAG
Suggested primer 2:TGCCTGTACATTGGAGCTGG