Insertion junction: CLIP2.002702_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002702
Chromosome:chromosome 7
Location:246305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313800 CGL138 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATCAACAGGTGGTGGGCGGGAAATGAGGTGCGCGGGGGTAGGCCAA
Internal bar code:CAGAGTTTTGTAGGGCTGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1703
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTGAGGGATGTTGTCA
Suggested primer 2:ACTTCGCTAACCCATCCTGC