Insertion junction: CLIP2.002704_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002704
Chromosome:chromosome 17
Location:571766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699650 DIV137 (1 of 3) IPR001441 - Decaprenyl diphosphate synthase-like; Hypothetical protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGCTGGCCTGGCCGGCTCACCGGACACGTCCTGCCCTGATGATGAGT
Internal bar code:TCTAGCACGGGCGACTTCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGTCTCAAGTGTCGAA
Suggested primer 2:CGTGCCATAACTTCATGCCG