Insertion junction: CLIP2.002708_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002708
Chromosome:chromosome 17
Location:5017399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) 3'UTR
Cre17.g735876 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGATAGGCAGGATGGTGAATGTTGAGAGGCCCAGGACGAGGCCCACC
Internal bar code:CATGTAACCAGGGCTTTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACGGGGAGGATTCGTTG
Suggested primer 2:TTTCAGGCGTGTTGCTTTCG