Insertion junction: CLIP2.002720_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002720
Chromosome:chromosome 3
Location:632989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145567 CGL18 Conserved in the Green Lineage; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATCAGGTTGCTGTAAGTTCGCTGCATTCCGCGATATCAAATGTTTGG
Internal bar code:CACCCTCACATTAAGGAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAAGCCGCCCCGTTATA
Suggested primer 2:AGTCTGCAACATCCCCATGG