Insertion junction: CLIP2.002724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002724
Chromosome:chromosome 14
Location:1018803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614000 CGL17 Conserved in the Green Lineage; (1 of 1) PTHR35699:SF1 - F2J10.10 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTCATCAAGTACGGTAGCAACGAGAACTACCAAACCGTAATACTGCG
Internal bar code:GTTGATTTGTACGCAGTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACACACACACGCACAC
Suggested primer 2:CGTCGAAAACACGCTTTGGT