Insertion junction: CLIP2.002724_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002724
Chromosome:chromosome 14
Location:1018813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614000 CGL17 Conserved in the Green Lineage; (1 of 1) PTHR35699:SF1 - F2J10.10 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACTGCTAAGTACTTGCCGGCTCCCATGTCACCCTCCCGCCCACGCC
Internal bar code:GTTGATTTGTACGCAGTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGAAAACACGCTTTGGT
Suggested primer 2:GTACACACACACACGCACAC