Insertion junction: CLIP2.002725_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002725
Chromosome:chromosome 7
Location:3663289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337516 CGL75,SMM27 (1 of 1) PTHR18895//PTHR18895:SF74 - METHYLTRANSFERASE // HEMK METHYLTRANSFERASE FAMILY MEMBER 1; Conserved in the green lineage 75 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGGGCGGCCTGGCCCGTGCTGGTGCTGGTGCCGGAGCTGGTGGCGCT
Internal bar code:CCTGAATTTATAACACCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAAGAAGAACAAGGTGG
Suggested primer 2:TTACCTCGAACGCGACTAGC