Insertion junction: CLIP2.002725_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002725
Chromosome:chromosome 7
Location:3663298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337516 CGL75,SMM27 (1 of 1) PTHR18895//PTHR18895:SF74 - METHYLTRANSFERASE // HEMK METHYLTRANSFERASE FAMILY MEMBER 1; Conserved in the green lineage 75 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCCGCGCCACGTGCGTGTGGTGTTGGGCAGCTGGTTCGCCCCGCTGC
Internal bar code:CCTGAATTTATAACACCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:57
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCTCGAACGCGACTAGC
Suggested primer 2:GCGCAAGAAGAACAAGGTGG