Insertion junction: CLIP2.002728_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002728
Chromosome:chromosome 5
Location:1579320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234750 CGLD25 Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGTGGTGCAGCTGTTGGGCATGTCACAAAACCGTGAACGACCCCTG
Internal bar code:CTTTTCGGGAATCATAAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTGGCAACCACCTTAT
Suggested primer 2:CCCCGTCTTTGTGGGCTTAT