Insertion junction: CLIP2.002741_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002741
Chromosome:chromosome 1
Location:3473156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022600 CGL13 Conserved in the Green Lineage; (1 of 2) 2.8.2.20 - Protein-tyrosine sulfotransferase / Tyrosylprotein sulfotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCGGTTCAGTGGCGGCATCCACGCGAGGACGTCATGAGGTCAAGT
Internal bar code:CTACTCGATATCCTGTATGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2193
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCACCTGGTGTAACGTC
Suggested primer 2:ATCGCACAGCCAAACCCTTA