Insertion junction: CLIP2.002756_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002756
Chromosome:chromosome 8
Location:3136454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376150 CGL150 (1 of 1) K17866 - diphthamide biosynthesis protein 2 (DPH2); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTCCTTGGGCCCGTGGGCTCTGTTAAACATGCACTCCCCTGCGTGTT
Internal bar code:GGGTGAAATTCGGGCACCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGCACGAACACAGGAC
Suggested primer 2:GAACGGTTACCCCCTTCAGG