Insertion junction: CLIP2.002760_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002760
Chromosome:chromosome 4
Location:2383180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221250 (1 of 1) PF11378 - Protein of unknown function (DUF3181) (DUF3181) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCGGGGGTTTGGCCTCTCCCGGGGTCGCGGTCGCCGTCGCATGAA
Internal bar code:GGTCTTGGGAAAGTGTAGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCCTCCCCTGATGCTT
Suggested primer 2:CAATCTGATCAAAGCGCCCG