Insertion junction: CLIP2.002769_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002769
Chromosome:chromosome 9
Location:6650366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416500 CGL151 Conserved in the Green Lineage; (1 of 2) IPR026939 - At2g23090-like CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGCCCAACCTTGCCGCCCAACCGGTCCGCGAGGCCCGCCTGGCCA
Internal bar code:CAGGGTGTAAGTGTGGTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3372
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGCGCCACACATTGAGC
Suggested primer 2:CGAGTCCTCATGAGACGCTC