Insertion junction: CLIP2.002770_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002770
Chromosome:chromosome 3
Location:2619284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160400 SAC1 (1 of 1) IPR001898//IPR004680//IPR006037//IPR029062 - Sodium/sulphate symporter // Citrate transporter-like domain // Regulator of K+ conductance, C-terminal // Class I glutamine amidotransferase-like; Sulfur acclimation 1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGTGATGAGCGCACCTGTCACGGTCATGGCCTTGGCCACGCCGAAGC
Internal bar code:AGTACAAGGCTTTCACCGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1843
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTAATCGTGCTCAACAG
Suggested primer 2:ACACATGGTAAGCAGGAGCC