Insertion junction: CLIP2.002771_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002771
Chromosome:chromosome 3
Location:5978528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189300 PLAP10,PLP10 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin); Plastid lipid associated protein 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCAGAAACACTATTCGCGTTGCGAATCTGCTATACATGTAACGACAT
Internal bar code:TTGCCTCAAAGGGGGTCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACACACACGGTACACC
Suggested primer 2:TAACTTCGCCTCGTTGCTGT