Insertion junction: CLIP2.002774_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002774
Chromosome:chromosome 5
Location:3579957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGCGCTGGGCAAGTCCTATGTTGATACGTGAACTTCGGGCCCCCGT
Internal bar code:CACCGCTGAACTAGGAGACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAACACTAGCGCATACG
Suggested primer 2:GCCATCTCCCTGCCCATATC