Insertion junction: CLIP2.002774_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002774
Chromosome:chromosome 5
Location:3579962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATCGTGGGTTCAACAGCTCAATTGTGCATTAGCTGTAAAACTATGGC
Internal bar code:TAGAAAGCCTTCGCCTGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3673
LEAP-Seq percent confirming:99.0476
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATCTCCCTGCCCATATC
Suggested primer 2:GGCAAACACTAGCGCATACG