Insertion junction: CLIP2.002789_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002789
Chromosome:chromosome 6
Location:2025170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACAGTGCACCTGGCCACTGACAAGGCCACGGGGCAGGAGTGAGTCCG
Internal bar code:TGGATACACCTAGGTACGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCAGGCTACATCCTAGT
Suggested primer 2:TACGTTCGGCTCCAGTCCTA