Insertion junction: CLIP2.002807_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002807
Chromosome:chromosome 17
Location:4249038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729700 CGL133 (1 of 1) PTHR14374:SF0 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 11; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGTGATTCAGGGGTGTGGCGGGGCGGGGCTGGGTGCTGGGTGCTGGG
Internal bar code:GTGGAGATTCCCTGTTAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCAATCTTGGTCGCTGT
Suggested primer 2:GAAGATGGTGGTGGGGTCAG