Insertion junction: CLIP2.002817_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002817
Chromosome:chromosome 1
Location:2040861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011200 (1 of 1) PF04658 - TAFII55 protein conserved region (TAFII55_N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCTTCTTGCACCTGGAGATAGTTTGATGAGCGCTCGTGTCCTTTTAT
Internal bar code:CTAACGCGTGAGTACGGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1413
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGATTCTAGCTCCTTCT
Suggested primer 2:TCCTATGACTGCCAGCTCCT