Insertion junction: CLIP2.002823_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002823
Chromosome:chromosome 11
Location:118100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467535 MCP26 (1 of 22) IPR018108//IPR023395 - Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGCCGGGCGCACAGGCGCGCAGCAAGCAGGATACCAGGAAGTCGAT
Internal bar code:GTAACTCGGGCCTCGACTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:44.7368
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGGGAAAAGATCAGGAC
Suggested primer 2:TATGGCACCGTTTCAGGCTT